miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST003255
species: Arabidopsis thaliana
miRNA family: MIRf427
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGAGCAAGAGCAGCTGCTTT

miRNA*
AGCTGTGGCTCTTGTGCTNCCT

mismatches: 3
bulges: 1

View larger
pre-miRNA
CGTGATCTAAGGAGAGCAAGAGCAGCTGCTTTGAACATTGTTCCTACTTCTACAGGNGCAGGTAAAGCTGTGGCTCTTGTGCTNCCTAACCTCAA

dot-bracket secondary structure
..(((....(((((.((((((((.((.((((((....((((.(((........))).)))).)))))).)).)))))))).)).)))....))).


SIMILARITIES
miRBase no hits

PMRD ath-miRf10919-akr: 1e-31

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record





Liczniki na strone;