ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf427
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGAGCAAGAGCAGCTGCTTT miRNA* AGCTGTNGCTCTTGTGCTC mismatches: 3 bulges: 0 |
pre-miRNA
GGAGAGCAAGAGCAGCTGCTTTGAACATTGTTCCTACTTCTACAGGAGCAGCTAAAGCTGTNGCTCTTGTGCTC
dot-bracket secondary structure
.(((.((((((((.((.((((((....((((((((........)))))))).)))))).)).)))))))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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GGAGAGCAAGAGCAGCTGCTTTGAACATTGTTCCTACTTCTACAGGAGCAGCTAAAGCTGTNGCTCTTGTGCTC
dot-bracket secondary structure
.(((.((((((((.((.((((((....((((((((........)))))))).)))))).)).)))))))).)))
SIMILARITIES| miRBase no hits PMRD ath-miRf10919-akr: 1e-24 microPC no hits | UniProt sp|P09672|G3PA_SINAL: 0.00006 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
