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ABOUT THIS RECORD

ID: MNEST003276
species: Arabidopsis thaliana
miRNA family: MIRf17
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCGACCTCGGGGTTGAGT

miRNA*
GCGACCTTGGGGTCGAGTGAT

mismatches: 2
bulges: 0

View larger
pre-miRNA
GAGTGATTGTCAGGTGATGGGATGAAGACACGCGACCTTGGGGTCGAGTGATGTGGTGAAGTAGTGATGTCCTCTACTCGACCAGGGGGTCGAGTGATCT
GTTGAGATCTTGAAGCTTCTACTCGACCTCGGGGTTGAGTGGTTTGACATGATCCGTCCCGCTTCTTC


dot-bracket secondary structure
((....))....((.(((((((((.((((((.(((((((((((((((((((.((..(((.((..(((((.....(((((((((....)))))))))...)
))))..)).)))..)).)).))))))))))))))))).)).))))..)))..))))))))........



SIMILARITIES
miRBase no hits

PMRD ath-miRf10335-akr: 1e-63

microPC no hits
UniProt no hits

RFAM MIR854: 0.0006
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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