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ABOUT THIS RECORD
ID:
MNEST003289
species:
Arabidopsis thaliana
miRNA family:
MIRf16
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCGACCAGGGGGTCGAGT
miRNA*
TCGACCTCGGGGTCGAGTGAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
GTCAGGTGATGGGATGAAAACAC
TCGACCTCGGGGTCGAGTGAT
GTGGTGAAGTAGTGATGTCCTC
TACTCGACCAGGGGGTCGAGT
GATCTGTTCTGAT
CTAAAAG
dot-bracket secondary structure
.......(((.(((.((...(((
((((((((..(((((((((..
..((....((....))..))..
)))))))))..))))))))))
).))...))).))
)......
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10835-akr
:
5e-46
microPC
no hits
UniProt
no hits
RFAM
MIR854: 0.00002
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
Source sequences
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