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ABOUT THIS RECORD

ID: MNEST003316
species: Arabidopsis thaliana
miRNA family: MIR869
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTGGTTCAATTCTGGTGTTG

miRNA*
 ACTCCAGGATTGGACCAGTAC

mismatches: 1
bulges: 0
View larger
pre-miRNA
 TCTGGCCATGTATGCCCACCATACAGATTTCCATACGGTAGAAGAAAGTATCACCTATCTCAACTCCAGGATTGGACCAGTACTAGGCTCATCATAGTTA
AGCCACAATCCACGATTCCTCATCAGCTATAAAAGCAAAACCTTCATATCTATCCTTGTTTCTAAACCAGTCTCATAGATATGAAGGCTTTGTTTCTGAT
GAAGGATTGTGGGATTGTTGCTTAACACTGATGAGCATATTATTGGTTCAATTCTGGTGTTGAGATAGTTGACACTTCTTATACCGNATGAAAACATGTG
TGGTGGGCTTAGACAACCATN

dot-bracket secondary structure
..(((...(((..((((((((((((..(((.(((.(((((.(((((.((.(((.((((((((((.(((((((((((((((((.((.((((((((..((((
(((.((((((((((((((.(((((((......(((((((.(((((((((((((.((.(((....))).))....))))))))))))).))))))))))))
)).))))))).))))))).)))))))..)))))))).)).))))))))))))))))).)))))))))).))).))))))).))))).))).)))..))))
))))))))....))).)))..


SIMILARITIES
miRBase ath-MIR869: 5e-166

PMRD no hits

microPC no hits		UniProt sp|O22781|SUVH2_ARATH: 0.000000002

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
Source sequences
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