ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIR860
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAATAGATTGGACTATATAT miRNA* ACATAGTCCAATCTATTGAAC mismatches: 1 bulges: 0 |
pre-miRNA
ATCTCTTAGTCAAATTTAATATACATAGTCCAATCTATTGAACTACTTACCCACATCAGCTTATTAGAGCTGGTGTACTAGTACTTCAATAGATTGGACT
ATATATATTGAATTTAACCAAGACA
dot-bracket secondary structure
...((((.((.((((((((((((.((((((((((((((((((.((((.....((((((((((....))))))))))...)))).))))))))))))))))
)).)))))))))))).)).))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
ATCTCTTAGTCAAATTTAATATACATAGTCCAATCTATTGAACTACTTACCCACATCAGCTTATTAGAGCTGGTGTACTAGTACTTCAATAGATTGGACT
ATATATATTGAATTTAACCAAGACA
dot-bracket secondary structure
...((((.((.((((((((((((.((((((((((((((((((.((((.....((((((((((....))))))))))...)))).))))))))))))))))
)).)))))))))))).)).))))..
SIMILARITIES| miRBase ath-MIR860: 8e-67 PMRD ath-miR860: 8e-67 microPC miR860: 2e-43 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR860 from microPC (MNEST046434) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
