ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIR860
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAATAGATTGGACTATATAT miRNA* ACATAGTCCAATCTAGTGAAC mismatches: 2 bulges: 0 |
pre-miRNA
AGCTCTTAGGCAAATTTAATATACATAGTCCAATCTAGTGAACTACTTACCCAGATCAGCTTATTAGAGCTGGTGTACTAGTACTTCAATAGATTGGACT
ATATATATTGAATTTAACCAAGACA
dot-bracket secondary structure
...((((.((.((((((((((((.(((((((((((((.((((.((((.......((((((((....)))))))).....)))).)))).)))))))))))
)).))))))))))))..))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGCTCTTAGGCAAATTTAATATACATAGTCCAATCTAGTGAACTACTTACCCAGATCAGCTTATTAGAGCTGGTGTACTAGTACTTCAATAGATTGGACT
ATATATATTGAATTTAACCAAGACA
dot-bracket secondary structure
...((((.((.((((((((((((.(((((((((((((.((((.((((.......((((((((....)))))))).....)))).)))).)))))))))))
)).))))))))))))..))))))..
SIMILARITIES| miRBase ath-MIR860: 2e-58 PMRD ath-miR860: 2e-58 microPC miR860: 9e-39 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
