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ABOUT THIS RECORD
ID:
MNEST003371
species:
Arabidopsis thaliana
miRNA family:
MIRf27
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGTGTCGATCAACACCATCG
miRNA*
ATGGTGTCGATCGACACTCGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
ATGGAAAATA
ATGGTGTCGATCGACACTCGG
ATGGTGTCGATCGACACTCGGA
TGGTGTCGATCAACACCATCG
CGTTTGGTTGACACCCTTTTTTATTT
TT
dot-bracket secondary structure
...(((((((
(.((((((((((((....(((
(((((((.((((((((((....
.)))))))))).)))))))).
)).)))))))))))).....))))))
))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10726-akr
:
0.000005
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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