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ABOUT THIS RECORD
ID:
MNEST003376
species:
Arabidopsis thaliana
miRNA family:
MIRf27
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGTGTCGATCGACACCTATG
miRNA*
TTGGTGTCGAGCAACACTAGG
mismatches:
4
bulges:
0
View larger
pre-miRNA
CGAAGAGACTCGAAATTTAATTGCCGTCAGATA
TTGGTGTCGAGCAACACTAGG
GG
TGGTGTCGATCGACACCTATG
CGAATTTTGGTCTCCGGATTTCT
TCTACAG
dot-bracket secondary structure
....(((((.((((((((.(((.......)))(
(.((((((((...((((((..
..
))))))...)))))))).)).
.))))))))))))).(((.....
)))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record