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ABOUT THIS RECORD
ID:
MNEST003383
species:
Arabidopsis thaliana
miRNA family:
MIRf16
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCGACCTGGTGGTCGAGT
miRNA*
TCGACCAGAGGGTCGAGTGGT
mismatches:
2
bulges:
0
View larger
pre-miRNA
TGAATATAC
TCGACCAGAGGGTCGAGTGGT
GAGTTGAAGTTGTGAAGTCCCCTACTCGACCAGGGGGTCGAGTGGTCTGTTGAGGTCTTGAAGCTTC
TAC
TCGACCTGGTGGTCGAGT
GGTTTG
dot-bracket secondary structure
..((..(((
(((((((..(((((((((((.
(((((.(((...(((......((((((((((....))))))))))....)))....)))..))))))
)))
)))))))..)))))))))
)..)).
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10152-akr
:
3e-45
microPC
no hits
UniProt
no hits
RFAM
MIR854: 4e-26
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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