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ABOUT THIS RECORD
ID:
MNEST003391
species:
Arabidopsis thaliana
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCGTAT
miRNA*
TAGATGGTGGTGAGGATGAGA
mismatches:
5
bulges:
0
View larger
pre-miRNA
AGTTCTTCTACATATAT
TAGATGGTGGTGAGGATGAGA
CTAGGAAAGATTGTGGAAGGCTTGAAGTCGAAGATAAAGACTGGTCTAAGGATGCGGAAGAG
ATCATCATTATCATCATCATCATATTCATCTTCATCATCATCGTCA
TCATCATCATCATCATCGTAT
GAGAAGATAGAGAAGAGC
dot-bracket secondary structure
.((((((((...(((.(
(.(((((((((((.(((((..
....((..(((((..(((((..((((...((.(((((.((.((((((.............))
)))))).))))).)).........)))))))))..))..))).)).
))))).)))))))))))....
...)).))).))))))))
SIMILARITIES
miRBase
ath-MIR414
:
0.0001
PMRD
ath-miR414
:
0.0001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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