ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIR2673
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTCTTCCTCTTCCTCTTCTT miRNA* GAAATGGAAGTGGATGAAATG mismatches: 5 bulges: 0 |
pre-miRNA
GGATTCTTCTTCCTCTTCCTCTTCTTCTTCTCCTTCTTCTTCCTACGGTGTTGCTCGTGTCAGCCATATCTCCAATCCTTGCATCTTCGGGGAAGTTGGG
TCGTCATCTTCGTCAACGTATAGAGATAAGAAATGGAAGTGGATGAAATGGG
dot-bracket secondary structure
......(((.(((.(((((..(((((..((((............((((...((..((..(((((....(((((...............))))).))))).
.)).))...)))).........)))).)))))..))))).))).))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGATTCTTCTTCCTCTTCCTCTTCTTCTTCTCCTTCTTCTTCCTACGGTGTTGCTCGTGTCAGCCATATCTCCAATCCTTGCATCTTCGGGGAAGTTGGG
TCGTCATCTTCGTCAACGTATAGAGATAAGAAATGGAAGTGGATGAAATGGG
dot-bracket secondary structure
......(((.(((.(((((..(((((..((((............((((...((..((..(((((....(((((...............))))).))))).
.)).))...)))).........)))).)))))..))))).))).))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q0WSN2|DAR2_ARATH: 0.00000000000002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
