ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR1507
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTCATTCCATACATCGTCTG miRNA* GAGGTGTATGGAGTGAGAGA mismatches: 0 bulges: 1 |
pre-miRNA
GTGTCTTAACGCAGTGTTTGGCAGAGGTGTATGGAGTGAGAGAAGGGAAAGGGTATTTTCCGATTCTGTCGTTACTCTCTTCCCTCTCTCATTCCATACAT
CGTCTGACGAACGTATCGTTGATTG
dot-bracket secondary structure
)....((((((...((((((.((((((((((((((((((((((.(((((((((((.....((((...)))).)))))).))))))))))))))))))))))
).)))).))))))...))))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
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GTGTCTTAACGCAGTGTTTGGCAGAGGTGTATGGAGTGAGAGAAGGGAAAGGGTATTTTCCGATTCTGTCGTTACTCTCTTCCCTCTCTCATTCCATACAT
CGTCTGACGAACGTATCGTTGATTG
dot-bracket secondary structure
)....((((((...((((((.((((((((((((((((((((((.(((((((((((.....((((...)))).)))))).))))))))))))))))))))))
).)))).))))))...))))))...
SIMILARITIES| miRBase gma-MIR1507a: 5.0E-56 PMRD gma-miR1507a: 5.0E-56 microPC miR1507: 8.0E-30 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gma-MIR1507a from miRBase (MNEST040483), gma-miR1507a from PMRD |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
