ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR1507
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTCATTCCATACATCGTCTG miRNA* GAGATGTATGGAGTGAGAGA mismatches: 0 bulges: 1 |
pre-miRNA
TCGCTGACGTTATCTTAACGCAATGTTTGACAGAGATGTATGGAGTGAGAGAAGGGAAATGATATTTTCCGATCCCATCGTTACTCTCTTTCCTCTCTCA
TTCCATACATCGTCTGACGAACCTAGCGTTGATTTGTTCTGCATG
dot-bracket secondary structure
..((.((((..(((..(((((...(((((.(((((((((((((((((((((((((((((((((.............))))))..)))))....)))))))
))))))))))).)))).)))))...)))))))).))))..))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
TCGCTGACGTTATCTTAACGCAATGTTTGACAGAGATGTATGGAGTGAGAGAAGGGAAATGATATTTTCCGATCCCATCGTTACTCTCTTTCCTCTCTCA
TTCCATACATCGTCTGACGAACCTAGCGTTGATTTGTTCTGCATG
dot-bracket secondary structure
..((.((((..(((..(((((...(((((.(((((((((((((((((((((((((((((((((.............))))))..)))))....)))))))
))))))))))).)))).)))))...)))))))).))))..))...
SIMILARITIES| miRBase gso-MIR1507b: 3e-48 PMRD gma-miR1507b: 3e-48 microPC miR1507: 1e-41 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
