ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR3522
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGACCAAATGAGCAGCTGA miRNA* AGCTGCTCATCTGTTCTCAGG mismatches: 2 bulges: 0 |
pre-miRNA
CAGGATCGTCCTGAGACCAAATGAGCAGCTGACCACATGATGCAGCTATGTTTGCTATTCAGCTGCTCATCTGTTCTCAGGTCGCCCTT
dot-bracket secondary structure
.(((..((.(((((((.((.((((((((((((.........((((......))))...)))))))))))).)).))))))).)).))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
CAGGATCGTCCTGAGACCAAATGAGCAGCTGACCACATGATGCAGCTATGTTTGCTATTCAGCTGCTCATCTGTTCTCAGGTCGCCCTT
dot-bracket secondary structure
.(((..((.(((((((.((.((((((((((((.........((((......))))...)))))))))))).)).))))))).)).))).
SIMILARITIES| miRBase gso-MIR3522b: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gso-MIR3522b from miRBase (MNEST040644) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
