ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR4409
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAACAAGTGGGTTTGTTGACTG miRNA* GTTGAAAAACCTAATGTTATT mismatches: 2 bulges: 1 |
pre-miRNA
CTCCATTAGAATAACAAGTGGGTTTGTTGACTGAAATAGTTGAAAAACCTAATGTTATTACTTATC
dot-bracket secondary structure
)........(((((((..(((((((.(((((((...))))))).))))))).))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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CTCCATTAGAATAACAAGTGGGTTTGTTGACTGAAATAGTTGAAAAACCTAATGTTATTACTTATC
dot-bracket secondary structure
)........(((((((..(((((((.(((((((...))))))).))))))).))))))).......
SIMILARITIES| miRBase gma-MIR4409: 6.0E-29 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gma-MIR4409 from miRBase (MNEST040624) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
