miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST003427
species: Glycine max
miRNA family: MIRf474
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GGTGTGGCATCATCAAGATGC

miRNA*
TTTTGGTTCTTGCCAAGCCAA

mismatches: 4
bulges: 1

View larger

pre-miRNA
GAGAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGT

dot-bracket secondary structure
..((...(((((((.(((((..((((((((.(((...)))))))))))...))))).)))))))..))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt sp|O80738|TPS10_ARATH: 0.0000002

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record