ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIRf519
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTATAGCATCATGAGCAATCA miRNA* ACTGCTCATGATGTTATATCA mismatches: 2 bulges: 0 |
pre-miRNA
CTAGCACACATTTTATTCAGGAATAATGAAGTATAGCATCATGAGCAATCAGCCTTAGATTTTTTTAGCAGATTGACTGCTCATGATGTTATATCATTTC
CATGAATTTACCTCTATGCATGC
dot-bracket secondary structure
...(((........(((((((((..((((..((((((((((((((((.((((.((((((....))))..)).)))).)))))))))))))))))))))))
).))))).........)))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
CTAGCACACATTTTATTCAGGAATAATGAAGTATAGCATCATGAGCAATCAGCCTTAGATTTTTTTAGCAGATTGACTGCTCATGATGTTATATCATTTC
CATGAATTTACCTCTATGCATGC
dot-bracket secondary structure
...(((........(((((((((..((((..((((((((((((((((.((((.((((((....))))..)).)))).)))))))))))))))))))))))
).))))).........)))....
SIMILARITIES| miRBase no hits PMRD ath-miRf11142-akr: 0.0000001 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
