ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTCCCAATTCCGCCCATTC miRNA* ATGGGCTGATTGGGAAGCAA mismatches: 2 bulges: 1 |
pre-miRNA
GTGAATACGAAGAGCTGGGAACGGGAGATTGGAGCAATCAGAATTTGTGGGAATGGGCTGATTGGGAAGCAATGTGTGCTGGTGCAATGCATTTAATTTC
TTCCCAATTCCGCCCATTCCTATGATTTCTGATGATTCTTTCCTTTCCTTTTGCTTTTTGCAATACGC
dot-bracket secondary structure
(((....((((((((.(((((.(((((...((((..(((((((.((((((((((((((.((((((((((.(((..((((.........))))...))).)
)))))))))..)))))))))))))).)))))))..))))))))))))))...))))))))...)))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GTGAATACGAAGAGCTGGGAACGGGAGATTGGAGCAATCAGAATTTGTGGGAATGGGCTGATTGGGAAGCAATGTGTGCTGGTGCAATGCATTTAATTTC
TTCCCAATTCCGCCCATTCCTATGATTTCTGATGATTCTTTCCTTTCCTTTTGCTTTTTGCAATACGC
dot-bracket secondary structure
(((....((((((((.(((((.(((((...((((..(((((((.((((((((((((((.((((((((((.(((..((((.........))))...))).)
)))))))))..)))))))))))))).)))))))..))))))))))))))...))))))))...)))..
SIMILARITIES| miRBase pvu-MIR482: 7e-65 PMRD pvu-miR482: 7e-65 microPC miR482: 8e-37 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gma-MIR482a from miRBase (MNEST040481) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
