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ABOUT THIS RECORD

ID: MNEST003441
species: Glycine max
miRNA family: miR482
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGGGCTGATTGGGAAGC

miRNA*
 TTCCCAATTCCGCCCATTCCTA

mismatches: 2
bulges: 1
View larger
pre-miRNA
 AGTGAATACGAAGAGCTGGGAACGGGAGATTGGAGCAATCAGAATTTGTGGGAATGGGCTGATTGGGAAGCAATGTGTGCTGGTGCAATGCATTTAATTT
CTTCCCAATTCCGCCCATTCCTATGATTTCTGATGATTCTTTCCTTTCCTTTTGCTTTTTGCAATACGCA

dot-bracket secondary structure
.(((.((.((((((((.(((((.(((((...((((..(((((((.((((((((((((((.((((((((((.(((..((((.........))))...))).
))))))))))..)))))))))))))).)))))))..))))))))))))))...))))))))..)).))).


SIMILARITIES
miRBase pvu-MIR482: 7e-65

PMRD pvu-miR482: 7e-65

microPC miR482: 8e-37		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: gma-MIR482a from miRBase (MNEST040481)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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deep sequencing data evidence




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