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ABOUT THIS RECORD

ID: MNEST003447
species: Glycine max
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTA

miRNA*
GAGCTCCTTGAAGTCCAATTG

mismatches: 3
bulges: 0

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pre-miRNA
GGATTATGAAGTGGAGCTCCTTGAAGTCCAATTGAGGATCTTACTGGGTGAATTGAGCTGCTTAGCTATGGATCCCACAGTTCTACCCATCAATAAGTGC
TTTTGTGGTAGTCTTGTGGCTTCCATATCTGGGGAGCTTCATTTGCCTTTATAGTATTAACCTTCTTTGGATTGAAGGGAGCTCTACACCCTTCTC


dot-bracket secondary structure
..........((((((((((((..(((((((..((((....((((((((((((.(((((.(((((.((((((..((((((..(((((((.((.....)).
...)).)))))..))))))..)))))).))))).))))).))))))))....))))....))))..)))))))..)))))))))))).........



SIMILARITIES
miRBase gma-MIR159a: 1e-106

PMRD gma-miR159a: 1e-106

microPC miR159: 2e-96
UniProt no hits

RFAM MIR159: 9e-19
most similar mature miRNAs

Identical with: miR159 from microPC (MNEST045395)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
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deep sequencing data evidence





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