ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR156
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCACA miRNA* TGCCCTCTCTTCCTCTGTCATC mismatches: 2 bulges: 1 |
pre-miRNA
CTCATGTTGACAGAAGAGAGAGAGCACAACCCGGGAATGGCTAAAGGAGTCTTTGCCTTTGTTGGGAGTGTGCCCTCTCTTCCTCTGTCATCATCA
dot-bracket secondary structure
...(((.(((((((.(((((((.(((((.(((((.((.(((.((((....))))))).)).)))))..))))).)))))))..))))))).)))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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CTCATGTTGACAGAAGAGAGAGAGCACAACCCGGGAATGGCTAAAGGAGTCTTTGCCTTTGTTGGGAGTGTGCCCTCTCTTCCTCTGTCATCATCA
dot-bracket secondary structure
...(((.(((((((.(((((((.(((((.(((((.((.(((.((((....))))))).)).)))))..))))).)))))))..))))))).)))..
SIMILARITIES| miRBase gma-MIR156b: 1e-49 PMRD gma-miR156b: 1e-49 microPC miR156: 1e-40 | UniProt no hits RFAM mir-156: 6e-21 | most similar mature miRNAs |
Identical with: miR156 from microPC (MNEST046600) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
