ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIRf772
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGCTCTCTATACTTCTGTCA miRNA* ACAGAAGATAGAGAGCACAG mismatches: 0 bulges: 1 |
pre-miRNA
TACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATCT
TACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTT
dot-bracket secondary structure
....(((.....(((((...(((((((((((((((((((((((.(((((.(((((((...(((..........((....))....)))...))))))).)
)).)).)))))))))))))).)))))))))..)))))......)))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATCT
TACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTT
dot-bracket secondary structure
....(((.....(((((...(((((((((((((((((((((((.(((((.(((((((...(((..........((....))....)))...))))))).)
)).)).)))))))))))))).)))))))))..)))))......)))...
SIMILARITIES| miRBase gma-MIR156d: 5e-81 PMRD gma-miR156d: 5e-81 microPC miR157: 0.0000000000001 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
