ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR157
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGACAGAAGATAGAGAGCAC miRNA* GCTCTCTATACTTCTGTCATCA mismatches: 1 bulges: 1 |
pre-miRNA
CTACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATC
TTACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTTC
dot-bracket secondary structure
.....(((.....(((((...(((((((((((((((((((((((.(((((.(((((((...(((..........((....))....)))...))))))).
))).)).)))))))))))))).)))))))))..)))))......)))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
CTACTTGGTAATTAAGGTTGTTGACAGAAGATAGAGAGCACAGATGATGATATGCATATTATATAATATATAGCAGGGAACTCATGATGAATTGTGCATC
TTACTCCTTTGTGCTCTCTATACTTCTGTCATCACCTTCAGCCTCCATTTC
dot-bracket secondary structure
.....(((.....(((((...(((((((((((((((((((((((.(((((.(((((((...(((..........((....))....)))...))))))).
))).)).)))))))))))))).)))))))))..)))))......)))....
SIMILARITIES| miRBase gma-MIR156d: 3e-82 PMRD gma-miR156d: 3e-82 microPC miR157: 0.0000000000001 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
