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ABOUT THIS RECORD

ID: MNEST003467
species: Glycine max
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGCCAAGGATGACTTGCCGG

miRNA*
 GGCAAGTTGTGTTTGGCTATG

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TATTATATCTACCCTAAGAGGGACTTACATGAAGAGGAAGAGAGAGTGATGCAGCCAAGGATGACTTGCCGGCGTTATTATTTGCTCATGTTCATGCTCA
CCGGTTTCCTTGCCGGCAAGTTGTGTTTGGCTATGTTTTGCTCTCTTCTTCTCATGTAAGTGCCACTTAGGACCAATTGTTGG

dot-bracket secondary structure
............((((((.((.((((((((((.(((((((((((...((((.(((((((.((((((((((((((.........((..........))...
..........)))))))))))))).))))))).))))...))))))))))))))))))))).)).)))))).((((...))))


SIMILARITIES
miRBase gma-MIR169a: 3e-64

PMRD gma-miR169a: 3e-64

microPC miR169: 0.00000004		UniProt no hits

RFAM MIR169_2: 0.000003		most similar mature miRNAs

Identical with: gma-MIR169a from miRBase (MNEST040449)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence




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