ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR1508
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGAAAGGGGAATAGCAGTTG miRNA* ACTGCTATTCCCATTTCTAAA mismatches: 1 bulges: 0 |
pre-miRNA
TGTGAAGTTGAATTGCTATTCAACTGCTATTCCCATTTCTAAACCTTGTTACACGAGCATCTTGATCAATGGTCTAGAAAGGGGAATAGCAGTTGAGTGG
TGCTTCAACGATAA
dot-bracket secondary structure
......((((((.(((((((((((((((((((((.((((((.((((((...((.((...)).))..))).))).)))))).)))))))))))))))))))
)).)))))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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TGTGAAGTTGAATTGCTATTCAACTGCTATTCCCATTTCTAAACCTTGTTACACGAGCATCTTGATCAATGGTCTAGAAAGGGGAATAGCAGTTGAGTGG
TGCTTCAACGATAA
dot-bracket secondary structure
......((((((.(((((((((((((((((((((.((((((.((((((...((.((...)).))..))).))).)))))).)))))))))))))))))))
)).)))))).....
SIMILARITIES| miRBase gma-MIR1508b: 6e-49 PMRD gma-miR1508b: 6e-49 microPC miR1508: 5e-37 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gma-MIR1508b from miRBase (MNEST040486) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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