ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTA miRNA* GGTCATGCTGTGCTAGCCTCACT mismatches: 1 bulges: 2 |
pre-miRNA
AAAGGGTCACAAAGGAAAAAGTGAAGCTGCCAGCATGATCTAGCTTTGGTTAGTGGGAGCGAGATAGTGCTAACCCTCACTAGGTCATGCTGTGCTAGCC
TCACTCCTTCCTATTTGGAGACC
dot-bracket secondary structure
....((((.((((((((..(((((.((((((((((((((((((....((((((((............))))))))....))))))))))))).)).))).
)))))..)))))..)))..))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
AAAGGGTCACAAAGGAAAAAGTGAAGCTGCCAGCATGATCTAGCTTTGGTTAGTGGGAGCGAGATAGTGCTAACCCTCACTAGGTCATGCTGTGCTAGCC
TCACTCCTTCCTATTTGGAGACC
dot-bracket secondary structure
....((((.((((((((..(((((.((((((((((((((((((....((((((((............))))))))....))))))))))))).)).))).
)))))..)))))..)))..))))
SIMILARITIES| miRBase gma-MIR167b: 5e-62 PMRD gma-miR167b: 5e-62 microPC miR167: 1e-19 | UniProt no hits RFAM MIR167_1: 8e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
