ABOUT THIS RECORDspecies: Glycine max
miRNA family: miR166m
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAATGTTGGCTGGCTCGAGG miRNA* TCGGACCAGGCTTCATTCCCC mismatches: 2 bulges: 2 |
pre-miRNA
GGGTTAGTAGTAGTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTTCTCAAAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCA
TTCCCCTCAAAGCTCGCGTTTTTT
dot-bracket secondary structure
.........(((((.((((((((((((..((((((.((((((((((((((...))))((((((........))))))..)))))))))).))).))).))
)))))))))).))).)).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
GGGTTAGTAGTAGTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTTCTCAAAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCA
TTCCCCTCAAAGCTCGCGTTTTTT
dot-bracket secondary structure
.........(((((.((((((((((((..((((((.((((((((((((((...))))((((((........))))))..)))))))))).))).))).))
)))))))))).))).)).......
SIMILARITIES| miRBase mtr-MIR166e: 4e-16 PMRD gma-miR166o: 3e-32 microPC miR166: 3e-32 | UniProt no hits RFAM mir-166: 0.000000000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
