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ABOUT THIS RECORD

ID: MNEST003478
species: Glycine max
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCCC

miRNA*
GGAATGTTGGCTGGCTCGAGG

mismatches: 2
bulges: 2

View larger
pre-miRNA
GTTGGTATTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAATGAGGTTCACAGTGGATGGAACTATAAGGCTTCGGACCAGGCTTCATTCCCCTCA
AAAGTTC


dot-bracket secondary structure
.......((((((((((((..((((((.(((((((((((((....)))(((((.((.....)))))))..)))))))))).))).))).)))))))))))
)......



SIMILARITIES
miRBase mtr-MIR166e: 0.000000000000001

PMRD gma-miR166o: 2e-24

microPC miR166: 2e-42
UniProt no hits

RFAM mir-166: 0.00000000000003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
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deep sequencing data evidence





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