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ABOUT THIS RECORD
ID:
MNEST003478
species:
Glycine max
miRNA family:
MIR166
source:
miRNEST
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCCC
miRNA*
GGAATGTTGGCTGGCTCGAGG
mismatches:
2
bulges:
2
View larger
pre-miRNA
GTTGGTATTGAGG
GGAATGTTGGCTGGCTCGAGG
CTTTTCACAAATGAGGTTCACAGTGGATGGAACTATAAGGCT
TCGGACCAGGCTTCATTCCCC
TCA
AAAGTTC
dot-bracket secondary structure
.......((((((
((((((..((((((.((((((
(((((((....)))(((((.((.....)))))))..))))))
)))).))).))).))))))))
)))
)......
SIMILARITIES
miRBase
mtr-MIR166e
:
0.000000000000001
PMRD
gma-miR166o
:
2e-24
microPC
miR166
:
2e-42
UniProt
no hits
RFAM
mir-166: 0.00000000000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence