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ABOUT THIS RECORD

ID: MNEST003481
species: Glycine max
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 AATGCAGTGTGGTCCAAGG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TCAACAAGATCGGGAAGCTCACGTCTTGAGGGGAATGCAGTGTGGTCCAAGGAGATGATATATCACTTCACCATACTCATATCTTCACAAACTCATCAGA
TTCAGATGTAATAATAATTTGTAATATATGCATATTATGTCTCCTCGGACCAGGCTTCATTCCCTTCAATTACAGCTTCCATCATCTAAACCA

dot-bracket secondary structure
......((((..(((((((...((.((((((((((((.(((.((((((.(((((((..((((((....................................
....))))))...(((((.((((.....)))).)))))))))))).)))))).))).))))))))))))..)))))))))...))))......


SIMILARITIES
miRBase ptc-MIR166i: 0.00000001

PMRD gma-miR166r: 4e-73

microPC miR166: 0.000002		UniProt no hits

RFAM mir-166: 0.00001		most similar mature miRNAs

Identical with: gma-miR166r from PMRD (MNEST048553)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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