ABOUT THIS RECORDspecies: Glycine max
miRNA family: miR166m
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAATGTTGGCTGGCTCGAGG miRNA* TCGGACCAGGCTTCATTCCCC mismatches: 2 bulges: 2 |
pre-miRNA
AGGTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCCCTCAAA
AAT
dot-bracket secondary structure
.....((((((((((((..((((((.((((((((((((......))((((((........))))))..)))))))))).))).))).)))))))))))).
...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence
AGGTGTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCCCTCAAA
AAT
dot-bracket secondary structure
.....((((((((((((..((((((.((((((((((((......))((((((........))))))..)))))))))).))).))).)))))))))))).
...
SIMILARITIES| miRBase mtr-MIR166e: 0.000000000000001 PMRD gma-miR166o: 1e-43 microPC miR166: 1e-43 | UniProt no hits RFAM mir-166: 0.000000000000002 | most similar mature miRNAs |
Identical with: miR166 from microPC (MNEST044918) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
deep sequencing data evidence
