ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR398
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTGTTCTCAGGTCGCCCCTG miRNA* GGGTCGTCCTGAGATCACATG mismatches: 3 bulges: 0 |
pre-miRNA
GTGTAGGTAGAGGGATTCTACAGGGTCGTCCTGAGATCACATGAAGTAGAATATAAGCAGCCATATTTGCTTCTTGTCTCGTGTTCTCAGCTCATGTGTT
CTCAGGTCGCCCCTGCTGGACTATTCTCTACCAA
dot-bracket secondary structure
.....(((((((((..(((((((((.((.(((((((.(((((((.(((((((((((((((......))))))........)))))))..))))))))).)
)))))).)).))))).))))...)))))))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTGTAGGTAGAGGGATTCTACAGGGTCGTCCTGAGATCACATGAAGTAGAATATAAGCAGCCATATTTGCTTCTTGTCTCGTGTTCTCAGCTCATGTGTT
CTCAGGTCGCCCCTGCTGGACTATTCTCTACCAA
dot-bracket secondary structure
.....(((((((((..(((((((((.((.(((((((.(((((((.(((((((((((((((......))))))........)))))))..))))))))).)
)))))).)).))))).))))...)))))))))..
SIMILARITIES| miRBase vvi-MIR398c: 0.00000000003 PMRD vvi-miR398c: 0.00000000003 microPC miR398: 0.0000001 | UniProt no hits RFAM MIR398: 0.0000000005 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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