miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST003493
species: Glycine max
miRNA family: miR319c
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAGCTTTCTTCAGTCCACTCA

miRNA*
 CTTGGACTGAAGGGAGCTCCC

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AACCAAAGTACGTTGAAGACCCTAAGGTAAGAGAGCTTTCTTCAGTCCACTCATGGGTGACAGTAAGATTCAATTAGCTGCCGACTCATTCATCCAAATG
TTGAGTGTAAGCGAATAAATATACTCAGCAGATGAGTGAATGATGCGGGAGACAAATTGAATCTTAAGTTTCCTGTACTTGGACTGAAGGGAGCTCCCTT
TTCCTTTTGTCTCTTACTTCTTCTACT

dot-bracket secondary structure
.....(((((....((.(((...((((.(((.(((((((((((((((((...(((((.(((..((((((((((((..((.(((..((((((((.((..((
(((((((((..........)))))))))))..)).))))))))..))).))...)))))))))))).))).)))))...))))))))))))))))).)))
..))))..))))).)))))........


SIMILARITIES
miRBase gma-MIR319a: 2e-115

PMRD gma-miR319a: 2e-115

microPC miR319: 2e-93		UniProt no hits

RFAM MIR159: 4e-55		most similar mature miRNAs

Identical with: miR319 from microPC (MNEST044802)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;