ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR1520
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCAGAACATAACACGTGACA miRNA* TCACGTGTCATGTTGTGACAT mismatches: 4 bulges: 0 |
pre-miRNA
ATGTTGACGGTCACGTGTCATGTTGTGACATCCAACTAATCAGAACATAACACGTGACAATCATCA
dot-bracket secondary structure
.((.(((..(((((((((.(((((.(((...........))).))))).)))))))))..))).))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGTTGACGGTCACGTGTCATGTTGTGACATCCAACTAATCAGAACATAACACGTGACAATCATCA
dot-bracket secondary structure
.((.(((..(((((((((.(((((.(((...........))).))))).)))))))))..))).))
SIMILARITIES| miRBase gma-MIR1520k: 0.000000003 PMRD gma-miR1520d: 0.00005 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
