ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR4412
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTGGCGTAGATCCCCACAAC miRNA* TGCGGGTATCTTTGCCTCTGA mismatches: 4 bulges: 0 |
pre-miRNA
CCTACTGTTCTGTGTCGGGCCAGCAAAACTGTTGCGGGTATCTTTGCCTCTGAAGGAAAGTTGTGCCTATTATTATGGCTTATTGCTTTAGTGGCGTAGA
TCCCCACAACAGTTATGCTTGCACTGCCTTTTGTCTCCG
dot-bracket secondary structure
..(((......))).(((((.((((.((((((((.(((.((((.((((.((((((...(((...(((.........)))..))).)))))).)))).)))
).))).)))))))).)))).)).))).............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCTACTGTTCTGTGTCGGGCCAGCAAAACTGTTGCGGGTATCTTTGCCTCTGAAGGAAAGTTGTGCCTATTATTATGGCTTATTGCTTTAGTGGCGTAGA
TCCCCACAACAGTTATGCTTGCACTGCCTTTTGTCTCCG
dot-bracket secondary structure
..(((......))).(((((.((((.((((((((.(((.((((.((((.((((((...(((...(((.........)))..))).)))))).)))).)))
).))).)))))))).)))).)).))).............
SIMILARITIES| miRBase gma-MIR4412: 1e-44 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gma-MIR4412 from miRBase (MNEST040627) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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