ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR168
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGCTTGGTGCAGGTCGGGAA miRNA* CCCGCCTTGCATCAACTGAAT mismatches: 3 bulges: 0 |
pre-miRNA
TGTGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGGTTTTCGCGCGGAATGGANGAGCGGTCGCCGGCGCCGAATTGGATCCCGCCTTGCATCAAC
TGAATCGGAGGCCGCGG
dot-bracket secondary structure
..((((((((((.(((((.((((((((((.(((((.(((...((((.(((...(((..((....)).))).))))))).))).))))).)))))))))).
))))).)))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
Source sequences
degradome data
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deep sequencing data evidence
TGTGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGGTTTTCGCGCGGAATGGANGAGCGGTCGCCGGCGCCGAATTGGATCCCGCCTTGCATCAAC
TGAATCGGAGGCCGCGG
dot-bracket secondary structure
..((((((((((.(((((.((((((((((.(((((.(((...((((.(((...(((..((....)).))).))))))).))).))))).)))))))))).
))))).)))))))))).
SIMILARITIES| miRBase gma-MIR168: 3e-60 PMRD gma-miR168: 3e-60 microPC miR168: 3e-26 | UniProt no hits RFAM MIR168: 1e-16 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets
Source sequences
degradome data
download this record
deep sequencing data evidence
