ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIRf298
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGATATGACGCCGGAGAGGG miRNA* TTTGATTGCGTTGTATCCCTG mismatches: 5 bulges: 0 |
pre-miRNA
GTTGAGGGATATGACGCCGGAGAGGGTATTCGGGAAGATGGGTCATTTGCAGAGGCTGTTGGATCGGTTTTTGGCTTGTAGGCCTACTGGGTTGGCTAAG
AATAGTAGGATGGTTTTGATTGCGTTGTATCCCTGT
dot-bracket secondary structure
....(((((((((((((....((((.(((((.........(((((....((((((((..(((.(((.....))).)))..))))).)))...)))))...
.......))))).))))....)))))))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GTTGAGGGATATGACGCCGGAGAGGGTATTCGGGAAGATGGGTCATTTGCAGAGGCTGTTGGATCGGTTTTTGGCTTGTAGGCCTACTGGGTTGGCTAAG
AATAGTAGGATGGTTTTGATTGCGTTGTATCCCTGT
dot-bracket secondary structure
....(((((((((((((....((((.(((((.........(((((....((((((((..(((.(((.....))).)))..))))).)))...)))))...
.......))))).))))....)))))))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q8S9J8|CAP1_ARATH: 1e-17 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
