ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIRf1052
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAGGGGAGGAGAGCTGTTTA miRNA* AATGGCTCTTTTCACTCTTG mismatches: 3 bulges: 1 |
pre-miRNA
CCAAGACCATGTCTAGTTTTGCAATGGCTCTTTTCACTCTTGAACTTGCTGCTGCTAGTGTAGTAGGGAGTGTGTTAGTGAACATTGTGGACAAGGTCAC
TAGTGTAGGAGGGGAGGAGAGCTGTTTAGCAACCAACATTAACAGGG
dot-bracket secondary structure
...((((...)))).((((((((((((((((((((.((((((.((((.(((((((....))))))).))))...(((((((...(((....)))..))))
)))..))))))..)))))))))))))..))))..)))..........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCAAGACCATGTCTAGTTTTGCAATGGCTCTTTTCACTCTTGAACTTGCTGCTGCTAGTGTAGTAGGGAGTGTGTTAGTGAACATTGTGGACAAGGTCAC
TAGTGTAGGAGGGGAGGAGAGCTGTTTAGCAACCAACATTAACAGGG
dot-bracket secondary structure
...((((...)))).((((((((((((((((((((.((((((.((((.(((((((....))))))).))))...(((((((...(((....)))..))))
)))..))))))..)))))))))))))..))))..)))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
