ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR166
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCC miRNA* AATGTTGTCTGGCTCGAGG mismatches: 3 bulges: 0 |
pre-miRNA
GTAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAGGAGGAGGAGTAGAGTACTGAGATCAGTGAAAGTTTCCAATGGAAATTTACCCCTCTTACACAA
AAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAA
dot-bracket secondary structure
.....((((((..((((((.((((((((((........((((((.(((...(((((....)))))..(((((((...)))))))))).))))))......
....)))).)))))).))))))..))))))..........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
GTAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAGGAGGAGGAGTAGAGTACTGAGATCAGTGAAAGTTTCCAATGGAAATTTACCCCTCTTACACAA
AAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAA
dot-bracket secondary structure
.....((((((..((((((.((((((((((........((((((.(((...(((((....)))))..(((((((...)))))))))).))))))......
....)))).)))))).))))))..))))))..........
SIMILARITIES| miRBase gma-MIR166b: 3e-57 PMRD gma-miR166b: 3e-57 microPC miR166: 0.0000000000005 | UniProt no hits RFAM mir-166: 0.000000000009 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
