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ABOUT THIS RECORD

ID: MNEST003552
species: Glycine max
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 AATGTTGGCTGGCTCGAGG

mismatches: 2
bulges: 2
View larger
pre-miRNA
 GAGTGTTGTGTTGAGATGGGTTGGTATTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCACAAATGAGGTTCACAGTGGATGGAACTATAAGGCTTCGGA
CCAGGCTTCATTCCCCTCAAAAGTTCTTCCTTTCATTTGTTTCTA

dot-bracket secondary structure
(((...((...(((((.(((..((..((((((((((((..((((((.(((((((((((((....)))(((((.((.....)))))))..)))))))))).
))).))).))))))))))))....)).))))))))..)).)))..


SIMILARITIES
miRBase mtr-MIR166e: 0.000000000000002

PMRD gma-miR166o: 2e-24

microPC miR166: 3e-42		UniProt no hits

RFAM mir-166: 0.00000000000004		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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