ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR2109
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCGAGTGTCTTCGCCTCTG miRNA* GAGGCGTAGATACTCACACC mismatches: 2 bulges: 0 |
pre-miRNA
CGGTGCTGGCATTCTCAAGCCAGTGAAATCGGTGCGAGTGTCTTCGCCTCTGAGAGAGATACTATGAGATCTCAAGCCTCGGAGGCGTAGATACTCACAC
CTCTTTTTCTGGCTATCTCACCACTGCTCT
dot-bracket secondary structure
(((((.(((.((.....((((((.((((..((((.((((((((.((((((((((.(((((........)))))....)))))))))).)))))))).)))
)..)))).)))))))).))).)))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
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CGGTGCTGGCATTCTCAAGCCAGTGAAATCGGTGCGAGTGTCTTCGCCTCTGAGAGAGATACTATGAGATCTCAAGCCTCGGAGGCGTAGATACTCACAC
CTCTTTTTCTGGCTATCTCACCACTGCTCT
dot-bracket secondary structure
(((((.(((.((.....((((((.((((..((((.((((((((.((((((((((.(((((........)))))....)))))))))).)))))))).)))
)..)))).)))))))).))).)))))....
SIMILARITIES| miRBase gso-MIR2109: 4e-50 PMRD gma-miR2109: 1e-34 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: gso-MIR2109 from miRBase (MNEST040641) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
