ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCAGCCACATGATCTGT miRNA* AGATCATGCTGGCAGCTTCAAC mismatches: 2 bulges: 1 |
pre-miRNA
TATATGCTTCCATTCAACAGGTGAAGCAGCCACATGATCTGTTCTTACCAATAGAAGGTAAACTCAGATCATGCTGGCAGCTTCAACTGCTGCAGGTGCA
CGACA
dot-bracket secondary structure
....(((..((...((.(((.((((((.(((((((((((((...(((((.......)))))...))))))))).)))).)))))).))).))..)).)))
.....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TATATGCTTCCATTCAACAGGTGAAGCAGCCACATGATCTGTTCTTACCAATAGAAGGTAAACTCAGATCATGCTGGCAGCTTCAACTGCTGCAGGTGCA
CGACA
dot-bracket secondary structure
....(((..((...((.(((.((((((.(((((((((((((...(((((.......)))))...))))))))).)))).)))))).))).))..)).)))
.....
SIMILARITIES| miRBase gso-MIR167a: 5e-40 PMRD gma-miR167n: 2e-30 microPC miR167: 2e-30 | UniProt no hits RFAM MIR167_1: 0.00000002 | most similar mature miRNAs |
Identical with: gso-MIR167a from miRBase (MNEST040632) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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