ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIRf1383
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTTTGGGATGGGTGACCGAA miRNA* CGGAAGCCTGTCTTAAAAGAA mismatches: 3 bulges: 0 |
pre-miRNA
TTTTTTTTTTCGGAAGCCTGTCTTAAAAGAACCTCCAGGTTAAGCGTGCTTGGCTTAGAGAAATTTTGGGATGGGTGACCGAATAGGAATTTTTCTTGGGG
T
dot-bracket secondary structure
).......(((((..(((((((((((((....(((.((((((((....)))))))).)))...)))))))))))))..)))))((((((...))))))...
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TTTTTTTTTTCGGAAGCCTGTCTTAAAAGAACCTCCAGGTTAAGCGTGCTTGGCTTAGAGAAATTTTGGGATGGGTGACCGAATAGGAATTTTTCTTGGGG
T
dot-bracket secondary structure
).......(((((..(((((((((((((....(((.((((((((....)))))))).)))...)))))))))))))..)))))((((((...))))))...
.
SIMILARITIES| miRBase no hits PMRD osa-miRf11419-akr: 2.0E-11 microPC no hits | UniProt no hits RFAM A5S_rRNA: 4.0E-10 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
