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ABOUT THIS RECORD
ID:
MNEST003565
species:
Zea mays
miRNA family:
MIRf1376
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGGATTAACCGAACAAGGCC
miRNA*
CTTGTTCGGTTAGCTCTCAAT
mismatches:
1
bulges:
2
View larger
pre-miRNA
ATGGTCCATATGTTTTGACAAACAGCTTAGGG
CTTGTTCGGTTAGCTCTCAAT
CCATGTGGATTGAGTGGGATTGGGTGGGTTTAAAACCCAAGCAAGTC
AAATTTCTTCACAATTTTTTCCAATCCCGTCCAATCCATAAGTAA
CGGGATTAACCGAACAAGGCC
TTAAGCATAGTAGTTCAAGCTTGGCTTTT
dot-bracket secondary structure
..((.(((...((((.(((..((.((((((((
(((((((((((((.((((...
...(((((((((.(((((((((((((((((...))))))........
...................))))))))))).))))))))).....
.)))))))))))))))).)))
))))))...)).))).)))).)))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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