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ABOUT THIS RECORD
ID:
MNEST003573
species:
Zea mays
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTACTCCCTCCGTTTCTATT
miRNA*
AAGGAACGGAGGGAGTACGTG
mismatches:
4
bulges:
0
View larger
pre-miRNA
TTTGGACAAGGGGTACTAGTT
AGTACTCCCTCCGTTTCTATT
TATTTGTCGCCCAATAGTTCAAATTTGTACTAACGGACGACATATATT
AAGGAACGGA
GGGAGTACGTG
TTTGATAGTTTCCTAGAC
dot-bracket secondary structure
.........((((.((((...
.(((((((((((((((((...
(((.(((((.((..((((.((....)).))))..)).))))).)))..
.)))))))))
))))))))...
.....)))).))))....
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11316-akr
:
0.0004
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.000002
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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