ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTACTCCCTCCGTTTCTATT miRNA* AAGGAACGGAGGGAGTACGTG mismatches: 4 bulges: 0 |
pre-miRNA
TTTGGACAAGGGGTACTAGTTAGTACTCCCTCCGTTTCTATTTATTTGTCGCCCAATAGTTCAAATTTGTACTAACGGACGACATATATTAAGGAACGGA
GGGAGTACGTGTTTGATAGTTTCCTAGAC
dot-bracket secondary structure
.........((((.((((....(((((((((((((((((...(((.(((((.((..((((.((....)).))))..)).))))).)))...)))))))))
))))))))........)))).))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTGGACAAGGGGTACTAGTTAGTACTCCCTCCGTTTCTATTTATTTGTCGCCCAATAGTTCAAATTTGTACTAACGGACGACATATATTAAGGAACGGA
GGGAGTACGTGTTTGATAGTTTCCTAGAC
dot-bracket secondary structure
.........((((.((((....(((((((((((((((((...(((.(((((.((..((((.((....)).))))..)).))))).)))...)))))))))
))))))))........)))).))))....
SIMILARITIES| miRBase no hits PMRD osa-miRf11316-akr: 0.0004 microPC no hits | UniProt no hits RFAM MIR1122: 0.000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
