ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIRf1365
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTTGGTGTCGAGCACGGCGA miRNA* GCGTGTCTTGAGACCGCAGTC mismatches: 3 bulges: 2 |
pre-miRNA
TACTTGCGTGTCTTGAGACCGCAGTCAGGGTTCACCCAGAGGATGTTGGTGTCGAGCACGGCGAGCATCTTGT
dot-bracket secondary structure
..((((((((.(((((.((((..(((.(((....)))....)))..)))).)))))))).)))))........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TACTTGCGTGTCTTGAGACCGCAGTCAGGGTTCACCCAGAGGATGTTGGTGTCGAGCACGGCGAGCATCTTGT
dot-bracket secondary structure
..((((((((.(((((.((((..(((.(((....)))....)))..)))).)))))))).)))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q42699|METE_CATRO: 0.0000008 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
