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ABOUT THIS RECORD

ID: MNEST003582
species: Zea mays
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 NATGGTGTCTGGGTCAAGGGC

mismatches: 3
bulges: 2
View larger
pre-miRNA
 GAGAAAGATGTGAAGCTATTTGCTTCTGAGTGGNATGGTGTCTGGGTCAAGGGCTTTTGCTTTGTGATCCNTCTGNGGAGAGCTTCTAAGTATTCCTTGG
ATCTGCAAGATCTCGGACCAGGCTTCATTCCCCTCNGAAATAGCTTCCAAAATGATATCGC

dot-bracket secondary structure
........((.(((((((((....((.(((.((.((((.((((((.((..(((.((((((.....(((((....(.((((.(((....))).)))).)))
))).)))))).))).)))))))).)))).)).))).)))))))))))))............


SIMILARITIES
miRBase zma-MIR166d: 3e-39

PMRD zma-miR166d: 3e-39

microPC miR166: 0.0000000000001		UniProt no hits

RFAM mir-166: 4e-42		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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