ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIRf1653
source: miRNEST
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAACGAGCCAGCTCGGCTCAT miRNA* GAGCCGAGCTGGCTCGTTATC mismatches: 2 bulges: 0 |
pre-miRNA
GCTCGCGAGCTAAACGAGCCAGCTCGGCTCATTGACGAGCTGAGCCGAGCTGGCTCGTTATCCACCCTAA
dot-bracket secondary structure
(((....)))..(((((((((((((((((((.........)))))))))))))))))))...........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCTCGCGAGCTAAACGAGCCAGCTCGGCTCATTGACGAGCTGAGCCGAGCTGGCTCGTTATCCACCCTAA
dot-bracket secondary structure
(((....)))..(((((((((((((((((((.........)))))))))))))))))))...........
SIMILARITIES| miRBase no hits PMRD osa-miRf12008-akr: 0.00005 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
