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ABOUT THIS RECORD
ID:
MNEST003591
species:
Zea mays
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTTCGTTCCAAAAT
miRNA*
TTTGGAAGAGGAGGAGTAATA
mismatches:
1
bulges:
2
View larger
pre-miRNA
TCACAAAAAAT
ATACTCCCTTCGTTCCAAAAT
ATATGTCATTTTAGTTTGGTCCTAAGTCAAACATCTTTAAGTTTGACGAAGTTCAGATAAAAATATAT
TAACATCTAGGACATCAAATAAACTAATTTAATGTCGTCGATTTTGATGAATTTTTCTATAAACTTGGCCAAGGTTACAGAACTTTGACTAAGAAGCAAA
CTAAATCAAAATACAT
TTTGGAAGAGGAGGAGTAATA
CATTGTTG
dot-bracket secondary structure
...........
.((((((((((.(((((((((
.(((.....(((((((((.((....(((((((........))))))).(((((.(((..(((((.(((
(((.(((...(((((.((((......)))).)))))...))).)))))).))))))))...)))))((.(((((((....))))))).))..))..))))
))))).....))).))
))))))))))).))))))...
........
SIMILARITIES
miRBase
sbi-MIR437v
:
0.00000005
PMRD
sbi-miR437v
:
0.00000005
microPC
miR437
:
0.0008
UniProt
no hits
RFAM
MIR1122: 0.00006
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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